CDS

Accession Number TCMCG018C15325
gbkey CDS
Protein Id XP_011652067.1
Location complement(join(379355..379453,379891..380363,381129..381577,381661..381758,381825..381920,382524..382637,383074..383199,383999..384091,384191..384256,385500..385580,385694..385876,386123..386200,386275..386466,386900..386956,387802..387822))
Gene LOC101215740
GeneID 101215740
Organism Cucumis sativus

Protein

Length 741aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA182750
db_source XM_011653765.2
Definition ribonuclease J isoform X3 [Cucumis sativus]

EGGNOG-MAPPER Annotation

COG_category AK
Description Zn-dependent metallo-hydrolase RNA specificity domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000578        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004527        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008409        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009658        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009798        [VIEW IN EMBL-EBI]
GO:0009880        [VIEW IN EMBL-EBI]
GO:0009914        [VIEW IN EMBL-EBI]
GO:0009942        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0060918        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCATGAAGATCACATTGGTAATTCCAGCTTTGGATTCTCATACACCAATATATGCATCTTCCTTTACAGTGGAGCTTATAAAAAAGCGTCTGAAGGAAAATGGGATTTTTGTTCCTTCTCGACTTAAGGTGTTTAAGATGAGAAAGAAATTTACAGCTGGTCCATTTGAAATAGAGCCAATTAGGGTCACTCATTCCATTCCCGATTGTTGTGGATTAGTTCTTCGATGTACTGATGGTACAATTCTTCATACTGGAGACTGGAAGATTGATGAATCGCCATTGGATGGTAAAGTATTTGATCGAGAAACTTTGGAACAACTATCAAAAGAAGGAGTGACTCTTATGATGAGTGACTCAACGAACGTACTATCTCCTGGAAGAACCATTAGTGAGTCTGTGGTGGCAGATGCACTTTTAAGACGTATCTCTGCCGCTAAAGGAAGGGTCATCACGACTCAGTTTGCTTCAAATATACACCGTCTTGGAAGTGTGAAAGCAGCCGCAGATTTAACTGGGAGAAAGTTGGTATTTGTTGGTATGTCTTTACGGACATATCTGGATGCAGCCTGGAAAGATGGGAAGGCACCAATCGATCCATCAACCTTGGTAAAAGTGGAGGACATTGATGCCTATGCTCCAAAAGATCTATTAATTGTTACAACTGGCTCACAAGCAGAACCACGTGCTGCGCTAAATCTTGCATCTTATGGAAGTAGTCACTCTCTTAAACTGAGCAAGGAAGACATGATTTTGTATTCGGCCAAGGTGATACCTGGTAACGAATCCAGAGTGATGAAAATGTTGAACCGTATATCAGAGATCGGATCAAATATAATAATGGGCAAGAACGAGTTGCTGCACACATCTGGTCATGGATACCGTGGAGAATTAGAGGAAGTACTTCAAATTGTAAAGCCGCAACATTTTTTACCCATTCATGGGGAGCTTTTATTCCTCAAGGAGCATGAACTGCTGGGTCGGTCTACTGGCATTCGGCACACAACTGTTATAAAAAATGGAGAAATGCTTGGAGTTTCTCATCTAAGAAACAGAAGAGTTTTATCCAACGGTTTCACCTCTCTTGGGAGGGAGAATTTACAGTTGAAGTATAGTGATGGTGACAAAGCATTTGGATCCTCATCTGAGCTTTTCGTTGATGAGAGACTAAAGATTGCAACAGATGGCATTATAGTAGTCAGTATGGAAATTTTGCGACCTCAAAGTGTAGATGGTTTAAATGGGACTGGCATCAAAGGAAAGCTAAGGATCACTACTCGATGTTTATGGCTTGACAAGGGGAAGCTTTTAGATGCACTTCATAAAGCCGCTCATGCTGCACTTTCAAGCTGCCCGCTGAATTGTCCTCTAGCTCACATGGAAAGAACTGTGGCTGAGCTTCTGAGGAAGATGGTTAGAAAGTACAGTGGTAAGAGGCCTGAAGTCATAGTCATGGCTGTGGAGAGCCCTGTAGGAGTTCTAGCCGAAGAGCTTGGAGCAAGGCTTGCAGGCAAGTCCAATAGTGGATTTGGGATGTCAGCATCACGAAAAGCAGTTGATGGACAACCAACTAAGAGCCACTTAAACAGCATAAGACCAGATGGAAATAACGATTTGCATTCTGAGGATAACTCAAGTCAGGAGTCTCAAGGTTATCATTTGGAATCTGAAAGACTACTTCCTGAAGAGGACTATGATACCACGAACTTGAACTTGACAGAGACACAATCCATTGATAACGAAGGTTTGGAGGATTTCTGGAAACCATTTATCACGCCATCCTCTCCTGCCAACGAATTGGCGATGGATAACGAAGGTTCTGTTCAACATTCAGAAAGTACGTTGGAGATTTCAAACGAACGTGAAGAAGTCAGTGATGACAAGTCACTGAAAACATCAAATTCTGATGTGAACTCTTCAAAGCCTGTGAAACGCAATAAATGGAAACCTGAGGAGATCAAGAAACTTATTAAATTGCGGGGGGAATTGCATGACAGGTTTCAAGTGGCCAGGGGACGAATGGCATTGTGGGAAGAGATATCCAATGGTATGTCGGCTGATGGTATTAATCGGAGTCCCGGACAGTGCAAATCTCTTTGGGCATCTCTGGTTCAGAAATTTGAGCAGGAAAGCAAAAGTGAAAAGAAAAGCAAGAAGGGTTGGCCATACTTGGAGGAAATGAGTGGCATATTGTCTGATTCAGAGGCAGTGGCAACAAAATGA
Protein:  
MAMKITLVIPALDSHTPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKKFTAGPFEIEPIRVTHSIPDCCGLVLRCTDGTILHTGDWKIDESPLDGKVFDRETLEQLSKEGVTLMMSDSTNVLSPGRTISESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDMILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHGYRGELEEVLQIVKPQHFLPIHGELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGRENLQLKYSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSVDGLNGTGIKGKLRITTRCLWLDKGKLLDALHKAAHAALSSCPLNCPLAHMERTVAELLRKMVRKYSGKRPEVIVMAVESPVGVLAEELGARLAGKSNSGFGMSASRKAVDGQPTKSHLNSIRPDGNNDLHSEDNSSQESQGYHLESERLLPEEDYDTTNLNLTETQSIDNEGLEDFWKPFITPSSPANELAMDNEGSVQHSESTLEISNEREEVSDDKSLKTSNSDVNSSKPVKRNKWKPEEIKKLIKLRGELHDRFQVARGRMALWEEISNGMSADGINRSPGQCKSLWASLVQKFEQESKSEKKSKKGWPYLEEMSGILSDSEAVATK